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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8010443 chr14:66726347 G/A ATP6V1D chr14:67761088-67826982:- 0.28 6.1 2.22E-9 Box Plot
THCA rs8010962 chr14:66726779 C/T ATP6V1D chr14:67761088-67826982:- 0.31 6.36 4.84E-10 Box Plot
THCA rs8011173 chr14:39859161 A/C LOC647288 chr13:75811890-75814517:- 0.52 11.33 1.56E-26 Box Plot
THCA rs80112372 chr18:64285828 A/T SPRY3 chrY:59100480-59115127:+ 0.53 6.43 3.14E-10 Box Plot
THCA rs8012768 chr14:39905334 C/A LOC647288 chr13:75811890-75814517:- -0.41 -7.99 1.0E-14 Box Plot
THCA rs80139108 chr6:170854269 G/A NCRNA00115 chr1:761587-762902:- 0.6 6.84 2.5E-11 Box Plot
THCA rs8014123 chr14:39796709 A/G LOC647288 chr13:75811890-75814517:- -0.53 -9.83 6.75E-21 Box Plot
THCA rs80150384 chr5:46296285 C/T LOC647121 chr1:121260910-121313686:+ -0.37 -7.94 1.45E-14 Box Plot
THCA rs8017737 chr14:39832523 C/T LOC647288 chr13:75811890-75814517:- 0.48 8.54 1.86E-16 Box Plot
THCA rs8017745 chr14:66720496 C/T ATP6V1D chr14:67761088-67826982:- -0.3 -6.18 1.39E-9 Box Plot
THCA rs8018717 chr14:39762236 A/G LOC647288 chr13:75811890-75814517:- 0.58 12.17 6.98E-30 Box Plot
THCA rs8018990 chr14:39762369 A/C LOC647288 chr13:75811890-75814517:- 0.42 8.33 8.69E-16 Box Plot
THCA rs8019067 chr14:66803685 G/T ATP6V1D chr14:67761088-67826982:- 0.43 7.51 2.92E-13 Box Plot
THCA rs8019246 chr14:39693950 A/G LOC647288 chr13:75811890-75814517:- 0.32 6.19 1.28E-9 Box Plot
THCA rs80192647 chr5:43666353 G/A UQCRC1 chr3:48636435-48648409:- -0.34 -5.97 4.51E-9 Box Plot